Rivera-Monroy, V. H ., Day, W. J., Twilley, R. R., Vera-Herrera, F., Coronado-Molina, C. 1995. Flux of nitrogen and sediment in a fringe mangrove forest in Terminos Lagoon, Mexico. Estuarine, Coastal and Shelf Science. 40:139-160.
Rivera-Monroy, V. H ., and Twilley, R. R. 1996. The role of denitrification and immobilization on the fate of inorganic nitrogen in mangrove sediments of Terminos, Lagoon, Mexico. Limnology and Oceanography. 41:284-296.
Twilley, R. R., Pozo, M., Garcia, V. H., Rivera-Monroy, V. H., Zambrano, R., Bodero, A. 1997. Litter dynamics in riverine mangrove forests in the Guayas River estuary, Ecuador. Oecologia. 111:109-122
Pelegri, S.P., V.H. Rivera-Monroy, and R.R. Twilley. 1997. A comparison of nitrogen fixation (acetylene reduction) among three species of mangrove litter, sediments, and pneumatophores in south Florida, USA. Hydrobiologia 356:73-79.
Day, J. W., Coronado-Molina, C., Vera-Herrera, F. R., Twilley, R., Rivera-Monroy, V. H., Alvarez-Guillen, H. Day, R., Conner, W. A. 1997. A 7 year record of above-ground net primary production in a southeastern Mexican mangrove forest. Aquatic Botany 55:39-60.
Rivera-Monroy, V. H ., Madden, C. J., Day, J. W., Twilley, R. R., Vera-Herrera, F. Alvarez-Guillen, H. 1998. Seasonal coupling of a tropical mangrove forest and an estuarine water column: enhancement of aquatic primary productivity. Hydrobiologia 379:41-53
Twilley, R. R., Gottfried, R. R, Rivera-Monroy, V. H., Zhang, W., Montaño-Armijos, M., Bodero, A. 1998. An Approach and preliminary model of integrating ecological and economic constrains of environmental quality in the Guayas River estuary, Ecuador. Environmental Science & Policy 1: 271-288
Rivera-Monroy, V. H., Torres, L. A., Bahamon, N., Newmark, F., Twilley, R. R. 1999. The potential use of mangrove forests as nitrogen sinks of shrimp aquaculture pond effluents: The role of denitrification. Journal of the World Aquaculture Society 30:12-25
Twilley, R. R., V. H. Rivera-Monroy, R. Chen, y L. Botero. 1999. Adapting an ecological mangrove model to simulate trajectories in restoration ecology. Marine Pollution Bulletin 37:404-419.
Twilley, R. R., Chen, R., Rivera-Monroy, V. H. 1999. Formulating a model of mangrove succession in the Caribbean and Gulf of Mexico with emphasis on factors associated with global climate change. Current Topics in Wetland Biogeochemistry. 3: 118-141.
Childers, D. L., Davis, S. E., Twilley, R., Rivera-Monroy, V. H. 1999. Wetland-water colmn interactions and the Biogeochemistry of estuary-watershed coupling around the Gulf of Mexico. In: Biogeochemistry of the Gulf of Mexico Estuaries. Bianchi, T. S., Pennock, J. R., Twilley, R. R (eds.). John Wiley and Sons. New York. pp. 211-236.
Twilley, R. R., Cardenas, W. Rivera-Monroy, V. H., Espinoza, J., Suescum, R. Armijos, M. M., Solorzano, L. 2001. The Gulf of Guayaquil and the Guayas River Estuary, Ecuador. In: Seelinger, U., and Kjerfve, B. (eds). Coastal Marine Ecosystems of Latin America. Ecological Studies, Vol 144. Speinger-Verlag, Berlin Heidelberg
Rivera-Monroy, V. H ., R. Twilley, E. Medina, E. B. Moser, L. Botero, M. Rodriguez, E. Bullard. 2004. Spatial Variability of Soil Nutrients in Disturbed Riverine Mangrove Forests at Different Stages of Regeneration in the San Juan River Estuary, Venezuela. Estuaries 27: 44-57.
Rivera-Monroy, V. H ., R. Twilley , Bone, D., Childers, D. L., Coronado-Molina, C., Feller, I. C., Herrera-Silveira, J., Jaffe, R., Mancera, E., Rejmankova, E., Salisbury, J. E., Weil, E. 2004. A Conceptual Framework to Develop Long Term Ecological Research and Management Objectives in the Tropical Coastal Settings of the Wider Caribbean Region. BioScience 54: 843856-000 .
Twilley, R. R., and V. H. Rivera-Monroy. 2005. Developing Performance Criteria Using Simulation Models of Mangrove Ecosystem Restoration: A Case Study of the Florida Coastal Everglades. Journal of Coastal Research 40: 79-93.
Marc Simard, Keqi Zhang, Victor H. Rivera-Monroy, Michael Ross, Pablo Ruiz, Robert Twilley, Ernesto Rodriguez. 2006. 3D Mapping and Biomass Estimation of Mangroves of the Everglades with SRTM Elevation Data. Photogrammetric Engineering & Remote Sensing 72:299-311
Rivera-Monroy , V. H, Kim de Mutsert, Robert R. Twilley, Edward Castaneda , Melissa M. Romigh, Stephen E. Davis, II. . In Press . Patterns of Nutrient Exchange in a Riverine Mangrove Forest in the Shark River Estuary, Florida, USA. Hydrobiologica.
Ewe, S.E., Daniel L. Childers, Evelyn E. Gaiser, David Iwaniec, Victor H. Rivera-Monroy, Robert R. Twilley, Jim Fourqurean . 2006. . Spatial and temporal patterns of aboveground net primary productivity (ANPP) in the Florida Coastal Everglades LTER (2001-2004). Hydrobiologia 459:474.
Cardona-Olarte, P., R. R. Twilley , & K.W. Krauss & V. H. Rivera-Monroy. 2006. Responses of neotropical mangrove seedlings grown in monoculture and mixed culture under treatments of hydroperiod and salinity. Hydrobiologia 325-341.